Lawrence Berkeley National Lab

ACS Publications List

2010

D. Agarwal, M. Humphrey, N. Beekwilder, K. Jackson, M. Goode, and C. van Ingen. A data centered collaboration portal to support global carbon-flux analysis. Concurrency and Computation: Practice and Experience - Successes in Furthering Scientific Discovery, December 2010. LBNL-1827E.
M. Altunay, D. Olson, and M. Helm. Osg-esnet joint identity management workshop report. OSG Doc 931, January 2010.
S. J. Bailey, Gl Aldering, P. Antilogus, C. Aragon, C. Baltay, S. Bongard, C. Buton, M. Chidress, N. Chotard, Y. Copin, H. Fakhouri, E. Gangler, S. Loken, P. Nugent, R. Pain, E. Pecontal, R. Pereira, S. Perlmutter, D. Rabinowitz, G. Rigaudier, K. Runge, R. Scalzo, G. Smadja C. Tao, R. C. Thomas, and C. Wu. Using spectra to make cosmology's best standard candles even better. Bulletin of the American Astronomical Society, 42:313, 2010.
S.T Bailey, G. Aldering, P. Antilogus, C. Aragon, C. Baltay, S. Bongard, C. Buton, M. Childress, N. Chotard, Y. Copin, H. Fakhouri, E. Gangler, S. Loken, P. Nugent, R.Pain, E. Pecontal, R. Pereira, S. Perlmutter, D. Rabinowitz, G. Rigaudier, K. Tunge, R. Scalzo, G. Smadja, C. Tao, R.C. Thomas, and C. Wu. Using spectra to make cosmology's best standard candles even better. Bulletin of the American Astronomical Society, 42:313, 2010.
S. Binet, P. Calafiura, S. Snyder, W. Wiedenmann, and F. Winklmeier. Harnessing multicores:strategies and implementations in atlas. J. Phys. Conf, (Ser.219:042002,2010), 2010. 17th International Conference on Computing in High Energy and Nuclear Phsics, Prague, Czech Republic, March 2009.
L. Hajdu, L. Dideno, , J. Lauret, and D. Olson. Comparison of cloud approaches: Overview and perspectives from star. In International Symposium on Grid Computing, Taipei, March 2010.
K. Jackson, L. Ramakrishnan, R. Thomas, and K.j. Runge. Seeking supernovae in the clouds: A performance study. In High Perfomrance Distributed Computing, Chicago, IL, June 2010.
R. Kettimuthu, A. Sim, D. Gunter, B. Allcock, P. T. Bremer, J. Bresnahan, A. Chrry, L. Childers, E. Dart, I. Foster, K. Hamms, J. Hick, J. Lee, M. Link, J. Long, K. Miller, V. Natarajan, V. Pascucci, K. Raffenetti, D. Ressman, S. Williams, L. Wilson, and L. Winkler. Lessons learned from moving earth systmen grid data sets over a 20 gbps wide-area network. In International Symposium on High Performance Distributed computing: Advanced Computing for Machinery, June 2010.
O. Komogortsev, Sl Jayarathna, C. Aragon, and M. Mahmoud. Biometric identification via an oculomotor plant mathematical model. In Eye Tracking Research and Applications, ETRA, Austin, TX, 2010.
J. Li, D. Agarwal, M. Humphrey, C. van Ingen, K. Jackson, and Y. Ryu. escience in the cloud: A modis satellite data reprojection and reduction pipeline in the windows azure platform. In 24th IEEE International Parallel and Distributed Precessing Symposium, IPDPS, Atlanta, Georgia, April 2010.
L.Ramakrishnan, K. Jackson, S. Canon, S. Cholia, and J. Shalf. Defining future platform requirements for e-science cloud (position paper). In ACM Symposium on Cloud Computing, Indianapolis, Indiana, June 2010.
A. Meier, C. Aragon, B. Hurwitz, D. Mujumdar, T. Peffer, D. Perry, and M. Pritoni. How people actually use thermostats. In The American Council for an Energy-Efficient Economy Conference, ACEEE 2010, 2010.
L. Ramakrishnan and B. Plale. A multidimensional classification model for scientific workflow characteristics. In 1st Int'l Workshop on Workflow Approaches for New Data-Centric Science, Indianapolis, Indiana, June 2010.
L. Ramakrishnan, D. Gannon, and B. Plale. Workem: Representing and emulating disturbed scientific workflow execution state. In 10th IEEE/ACM International Symposium on Cluster, Cloud and Grip Computing, CCGid, Melbourne, Australia, 2010.
L. Ramakrishnan, C. Guok, K. Jackson, E. Kissel, D. M. Swany, and D. Agarwal. Ondemand overlay networks for large scientific data transfer. In 10th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing, CCGrid, Melbourne, Australia, 2010.
R. Roberts, T.Trucano, P. Pope, C. Aragon, M. Jiang, T. Wei, L. Chilton, and Alan Bakel. On the verification and validation of geospatial image analysis algorithms. In IEEE International Geoscience and Remote Sensing Sympsium, IGARSS, 2010.
R. Scalzo, G. Aldering, P. Antilogus, C. Aragon, C. Baltay, S. Bailey, S. Bongard, C. Buton, M. Childress, N. Chotard, Y. Copin, E. Gangler, S. Loken, P. Nugent, R. Pain, E. Pecontal, R. Pereira, S. Perlmutter, D. Rabinowitz, G. Rigaudier, K. Runge, G. Smadja, H. Swift, C. Tao, R.C. Rabinowitz, G. Rigaudier, K. Runge, G. Smadja, H. Swift, C. Tao, R.C. Thomas, and C. Wu. Nearby supernova factory observations of sn 2007if: First total mass measurement of a super -chandrasekhar-mass progenitor. Astrophysical Journal, 713:1073–1094, March 2010.
R.A. Scalzo, C. Akerlof, G. Aldering, P. Antilogus, C. Aragon, S. Bailey, C. Baltay, A. Bauer, D. Birchall, S. Bongard, C. Buton, M. Childress, Y. Copin, A. Gal-Yam, E. Gangler, J. Holtzman, Sl Hoyer, M. Kasliwal, S. Loken, J. Miller, P. Nugent, R. Pain, E. Pecontal, R. Pereira, S. Perlmutter, C. Peters, G. Smadja, C. Tao, R.C. Thomas, J. Thorstensen, B. Weaver, C. Wu, and F. Yuan. Nearby supernova factory observations of sn 2007if: Evidence for shell structure in the explosion of a super-chandrasekhar-mass white dwarf,. American Astronomical Society,, 42:450, 2010.
R.A. Scalzo, C. Akerlof, G. Aldering, P. Antilogus, C. Aragon, S. Bailey, C. Baltay, A. Bauer, D. Birchall, S. Bongard, c. Buton, M. Childress, Y. Copin, A. Gal-Yam, E. Gangler, J. Holtzman, S. Hoyer, M. Kasliwal, S. Loken, J. Miller, S. Nugent, R. Quimby, D. Rabinowitz, A. Rau, G. Rigaudier, K. Runge, G. Smadja, C. Tao, R. C. Thomas, J. Thorstesen, B. Weaver, and C. Wu. Nearby supernova foctory observation of sn 2007if: Evidence for shell structure in the explosion of super-chandrasekhar-mass white dwarf. American Astronomical Society, AAS Meeting #215, #343.06:Bulletin of the American Astronomical Society, 42:450, 2010.
A. Sim, D. Gunter, V. Natarajan, A. Shoshani, D. Williams, J. Long, J. Hick, J. Lee, and E. Dart. Efficient bulk data:replication for the earthy systems grid. In International Symposium on Grid Computing.National Science Council, March 2010.
Y. Simmhan and L. Ranakrishnan. Comparison of resource platform selection approaches for scientific workflows. In 1st Workshop on Scientific Cloud Computing, Colocated with ACM and High Performance Distributed Computing, Chicago, Illinois, 2010.

2009

Y. Yao, P. Calafirua, J. Poffet, A. Cavalli, Cl. Leggett, and B. Frederic. Virtual machine logbook:enablingvirtualization for atlas. J. Phys.Conference Series, (219:032031), 2010. 17th Interntional Confernce on Computing in High Energy and Nuclear Physics 2009.
Cecilia R. Aragon. Collaborative analytics for astrophysics explorations,. In Shimon Y. Nof, editor, Springer Handbook of Automation. Springer-Verlag, 2009. in press(chapter) in book.
C. Aragon, S. Poon, A. Monroy-Hernandez, and D. Aragon. A tale of two online communities: Fostering collaboration and creativity in scientists and children. In ACM Conference on Creativity and Cognition, Berkeley, CA, 2009.
Cecilia Aragon, Sarah Poon, A. Monroy-Hernandez, and D. Aragon. A tale of two online communities: Fostering collaboration and creativity in scientists and children. In ACM Conference on Creativity and Cognition, Berkeley, CA, 2009.
C.R. Aragon, S. Poon, G. Aldering, R. C. Thomas, and R. Quimby. Using visual analytics to develop situation awareness in astrophysics,. Journal of Information Visualization, 2009.
S. Bailey, G. Aldering, P. Antilogus, C. Aragon, C. Baltay, S. Bongard, C. Buton, M. Childress, N. Chotard, E. Gangler Copin, S. Loken, P. Nugent, R. Pain, E. Pecontal, R. Pereira, S. Perlmutter, D. Rabinowitz, G. Rigaudier, K. Runge, R. Scalzo, G. Smadja, H. Swift, C., Tao, R. C. Thomas, and C. Wu. Using spectral flux ratios to standardize sn ia luminosities,. Astronomy & Astrophysics Letters, 2009.
S. Bailey, G. Aldering, P. Antilogus, C. Aragon, C. Baltay, S. Bongard, C. Buton, M. Childress, N. Chotard, Y. Copin, E. Gangler, S. Loken, P. Nugent, R. Pain, E. Pecontal, R. Pereira, S. Perlmutter, D. Rabinowitz, G. Rigaudier, P. Ripoche, K. Runge, R. Scalzo, G. Smadja, C. Tao, R. Thomas, and C. Wu. Generalized spectral correlations of type ia supernovae from the nearby supernova factory. Bulletin of the American Astronomical Society, 41, 2009.
S. Bailey, G. Aldering, P. Antilogus, C. Aragon, C. Baltay, S. Bongard, C. Buton, M. Childress, N. Chotard, Y. Copin, E. Gangler, S. Loken, P. Nugent, R. Pain, E Pecontal, R. Pereira, S. Perlmutter, D. Rabinowitz, G. Rigaudier, K. Runge, R. Scalzo, G. Smadja, H. Swift, C. Tao, R. C. Thomas, and C. Wu. Using spectral flux ratios to standardize sn ia luminosities. Astronomy & Astrophysics Letters, 2009.
B. Bargmeyer. Metadata registries: Research, standards development and practice. International Journal of Metadata, Semantics and Ontologies,Special Edition of Semantics and Ontologits, 4(4), November 2009.
Bruce Bargmeyer. Emerging semantic technology standards - making life easier in the information world. In Proceedings of the 12th Open Forum on Metadata Registries, Seoul, Korea, June 2009.
Bruce (editor) Bargmeyer. Metadata registries: Research, standards development and practice. International Journal of Metadata, Special Edition of Semantics and Ontologies (IJMSO),, 2009.
Bruce Bargmeyer and Sam Chance. Environmental data: Edge issues and the path forward. In Palle Haastrup and Jorgen Wuertz, editors, Environmental Data Exchange Network For Inland Water. Elsevier, 2009. ISBN-13: 978-0-444-52973-2.
B.Bargmeyer. Metadata registries and cloud computing-standards challenges. In 13th Open Forum on Metadata Registries, Kunming,China, May 2009.
S. Callaghan, E. Deelman, and et al. (in submission). Scaling up workflow-based applications. Journal of Computer and System Sciences, 2009. (Special Issue on Workflows).
K. Chard, J.; Boverhof, W Tan, R. Madduri, and I. Foster. Wrap scientific applications as wsrf grid services using gravi,. In The International Conference on Web Services, Los Angeles, CA, July 2009.
Y. Copin, G. Aldering, P. Antilogus, C. Aragon, S. Bailey, C. Baltay, S. Bongard, C. Buton, M. Childress, E. Gangler, J. Jerke, S. Loken, P. Nugent, R. Pain, E. Pecontal, R. Pereira, S. Perlmutter, D. Rabinovitz, G. Rigaudier, P. Ripoche, K. Runge, R. Scalzo, G. Smadja, H. Swift, C. Tao, R. C. Thomas, and C. Wu. The nearby supernova factory: First results. EAS Publications Series, 36:11–15, 2009.
C.R.Aragon and K. J. Runge. Workflow management for high volume supernova search,. In ACM Symposium on Applied Computing SAC '09, 2009.
Fred Gey. Dynamic change in classification systems: A preliminary model for instance-based matching,. Technical report, Lawrence Berkeley National Laboratory, 2009. Technical Report, available on the project website.
Kevin Keck, Bruce Bargmeyer, and et al. Committee draft 1 of iso/iec 11179 information technology – metadata registries (mdr) part 3 edition 3, 2009. Standard - published for international ballot.
O. Komogortsev, S. Jayarathna, C. Aragon, and M. Mahmoud. Biometric identificaton via an oculomotor plant mathematical model. Technical report, Texas State University, 2009. TXSTATE-CS-TR-2009-17.
J. Li, Y. Ryu, K. Jackson, D. Agarwal, M. Humphrey, and C. van Ingen. Process-based estimates of terrestrial co2 assimilation and eveovs. In Trans. American Geophysical Union, San Francisco, CA, December 2009. Fall Meet. Suppl.,Abstract B51B-0308.
L.Ramkrishnan, D. Nurmi, A. Mandal, C. Koelbel, D. Gannon, T.M. Huang, Y. S. Kee, G. Oberteli, K. Thyagaraja, R. Wolski, A. Yarhan, and D. Zagorodnov. Vgrads: Enabling escience workflows on grids and clouds with fault tolerance. In ACM/IEEE SC2009 Conference on High Performance Computing, Networking, Storage and Analysis, Portland, Oregon, Novebmber 2009.
C. McParland. The evolution of the internet community and the 'yet-to-evolve'smart grid community:parallels and lessons-to-be-learned. In Grid-Interop Forum, Denver,CO, November 2009.
M.A. Piette, G. Ghatikar, S. Kiliccote, E. Koch, D. Hennage, P. Palensky, and C. McParland. Open automated demand response communications specification (version 1.0). Technical Report LBNL-1779E, Lawrence Berkeley National Laboratory, 2009. CEC OpenADR - Version 1.0 Report. California Energy Commission, PIER Program. CEC-500-2009-063.
Sarah S. Poon, Rollin C. Thomas, Cecilia R. Aragon, and Brian Lee. Context-linked intelligent user interfaces,. In Workshop on Human Interaction with Intelligent and Networked Systems at the IUI International Conference on Intelligent User Interfaces, Sanibel Island, FL, 2009.
Lavanya Ramakrishnan and Daniel A. Reed. “predictable quality of service atop degradable distributed systems,. Cluster Computing, 2009.
L. Ramakrishnan, D. Nurmi, A. Mandal, C. Koelbel, D. Gannon, T. M. Huang, Y.-S. Kee, G. Oberteli, K. Thyagaraja, R. Wolski, A. Yarkhan, and D. Zagorodnov. Automated analysis for detecting beams in laser wakefield simulations,. In ACM/IEEE SC Conference, 2009.

2008

D. Agarwal, D. Baldocchi, M. Goode, M. Humphreys, C. van Ingen, D. Papale, M. Reichstein, M. Rodriguez, Y. Ryu, and R. Vargas. An evolving la thuile fluxnet dataset and support infrastructure. In European Geosciences Union General Assembly, Vienna, Austria., 2008. LBNL-1764E.
D. Agarwal, M. Humphrey, N. Beekwilder, M. Goode, K. Jackson, R. Weber, C. van Ingen, and D. Baldocchi. Interaction support for the global fluxnet data set,. Eos Trans. American Geophysical Union, December 2008. Fall Meet. Suppl., Abstract IN23B.
D. Agarwal, M. Humphrey, C. van Ingen, N.Beekwilder, M. Goode, K. Jackson, M. Rodriguez, and R. Weber. Fluxnet synthesis dataset collaboration infrastructure. Technical Report 1, Lawrence Berkeley National Laboratory, February 2008. LBNL-1273E.
Cecilia R. Aragon and Sarah S. Poon. Designing scientific workflow management systems for data-intensive astrophysics projects. In Designing Cyberinfrastructure to Support Science Workshop, CSCW 2008: ACM Conference on Computer Supported Cooperative Work, San Diego, CA, 2008.
Cecilia Aragon, Sarah Poon, Gregory Aldering, Rollin Thomas, and Robert Quimby. Using visual analytics to maintain situational awareness in astrophysics. In IEEE Symposium on Visual Analytics Science and Technology (IEEE VAST), Columbus, OH, 2008. LBNL-658E.
Cecilia R. Aragon, Stephen J. Bailey, Sarah Poon, Karl Runge, and Rollin C. Thomas. Sunfall: A collaborative visual analytics system for astrophysics. J. Phys.: Conf. Ser, 125(12091), 2008. LBNL-657E.
S. Bailey, C. Aragon, R. Romano, R. C. Thomas, B. A. Weaver, and D.Wong. Object classification at the nearby supernova factory. Astronomische Nachrichten, 329(3):292–294, 2008. LBNL-696E.
A Baranovski, K Beattie, S Bharathi, J Boverhof, J Bresnahan, A. Chervenak, I Foster, T Freeman, D Gunter, K Keahey, C Kesselman, R Kettimuthu, N Leroy, M Link, M Livny, R Madduri, G Oleynik, L. Pearlman, R Schuler, B Tierney, and Fermi National Accelerator Laboratory. Enabling petascale science: data management, troubleshooting, and scalable science services. Journal of Physics: Conference Series, 125(012068), 2008. (doi:10.1088/1742-6596/125/1/012068012068)
S Callaghan and et al. P Maechling. Reducing time-to-solution using distributed high-throughput mega-workflows� experiences from scec cybershake. In Fourth IEEE International Conference on eScience, Indianapolis, IN, 2008.
C. Guok, D. W. Robertson, E. Chaniotakis, M. R. Thompson, W. E. Johnston, and B. L. Tierney. A user driven dynamic circuit network implementation. In Distributed Autonomous Network Management Systems, 2008.
M. Humphrey, D. Agarwal, and C. van Ingen. Publication and curation of large-scale shared environmental scientific data. Technical report, Lawrence Berkeley National Laboratory, August 2008. MSR-TR-2008-93.
Marty Humphrey, Norm Beekwilder, Deb Agarwal, Dennis Baldocchi, Monte Goode, Jayant Gupchup, Catharine van Ingen, Dario Papale, Markus Reichstein, Matthew Rodriguez, Youngryel Ryu, Rodrigo Vargas, and Nolan Li. Creating and accessing the global fluxnet data set. In Microsoft eScience All Hands Meeting, Redmond, Washington, March 2008. LBNL- 1763E.
William Johnston, Brian Tierney, Craig Tull, Andrew Hanushevsky, and etal. Data-intensive computing in widely distributed environments, 2008.
Frank Olken and Le Gruenwald. Data stream management: Aggregation, classification, modeling, and operator placement. IEEE Internet Computing, 12(6):9–12, 2008.
Sarah S. Poon and Cecilia R. Aragon. Towards virtual radical collocation in science projects,. In Distributed Team Work Workshop, CSCW ACM Conference on Computer Supported Cooperative Work, San Diego,CA, 2008.
Sarah S. Poon, Rollin C. Thomas, Cecilia R. Aragon, and Brian Lee. Context-linked virtual assistants for distributed teams: An astrophysics case study. In CSCW: ACM Conference on Computer Supported Cooperative Work, San Diego, CA, 2008.
Daniela Ushizima, Oliver Ruebel, Prabhat, Gunther Weber, E. Wes Bethel, Cecilia Aragon, Cameron Geddes, Estelle Cormier-Michel, Bernd Hamann, Peter Messmer, and Hans Hagen. Automated analysis for detecting beams in laser wakefield simulations,. In Seventh International Conference on Machine Learning and Applications, Proceedings of IEEE ICMLA', 2008. LBNL-960E.
C. van Ingen. Environmental science as a data intensive science. In BWC and Innovation Center, Denmark, October 2008.
C. van Ingen, D. Agarwal, M. Humphrey, and J. Li. Deriving daytime variables from the ameriflux standard eddy covariance data set. In Eos Trans. American Geophysical Union, Fall Meet. Suppl., San Francisco, CA, December 2008.

2007

Michel Abdalla, Emmanuel Bresson, Olivier Chevassut, Bodo Moller, and David Pointcheval. Strong password-based authentication in tls using the three-party group diffie-hellman protocol. International Journal of Security and Networks, 2(284-96), April 2007. LBNL-59947.
D. Agarwal, D. Baldocchi, T. Boden, B. Cook, D. Frank, M. Goode, J. Gupchup, S. Holladay, M. Humphreys, C. van Ingen, B. Jackson, D. Papale, M. Reichstein, M. Rodriguez, Y. Ryu, R. Vargas, B. Wilson, and N. Li. Creating and accessing the global fluxnet data set. Eos Trans. American Geophysical Union, 88(52), 2007. Suppl., AbstractB33E-1657.
Deb Agarwal, Monte Goode, Jayant Gupchup, Jim Hunt, Catharine van Ingen, Rebecca Leonardson, Matt Rodriguez, and Nolan Li. Unifying diverse watershed data to enable analysis ,. In EOS Trans. American Geophysical Union Fall Meet. Suppl., number H11K, San Francisco, CA, December 2007. LBNL Technical Report LBNL-1272E.
Deb Agarwal, Monte Goode, Jayant Gupchup, Jim Hunt, Catharine van Ingen, Rebecca Leonardson, Matt Rodriguez, and Nolan Li. Using the database to rapidly assess fluxnet data,. In Eos Trans. American Geophysical Union Fall Meet. Suppl., number 52, San Francisco, CA, December 2007. LBNL-1272E.
Deb Agarwal, Catharine van Ingen, Susan Holladay, and Misha Krassovski. Ameriflux data server user tutorial,. In AmeriFlux Annual Meeting, Boulder, CO, October 2007.
Mark Allman and Vern Paxson. Issues and etiquette concerning use of shared measurement data. In ACM Internet Measurement Conference, 2007. LBNL-63276.
Mark Allman, Vern Paxson, and Jeff Terrell. A brief history of scanning. In ACM Internet Measurement Conference, October 2007. LBNL-63277.
D. H. Bailey, R. Lucas, P. Hovland, B. Norris, K. Yelick, D. Gunter, B. de Supinski, D. Quinlan, P. Worley, J. Vetter, P. Roth, J. Mellor-Crummey, A. Snavely, J. Hollingsworth, D. Reed, R. Fowler, Y. Zhang, M. Hall, J. Chame, J. Dongarra, and S. Moore. Performance engineering: Understanding and improving the performance of large-scale codes. CT Watch Quarterely, 3(4):18–23, November 2007. LBNL-63730.
K S Beattie, C T Day, D Glowacki, K D Hanson, J E Jacobsen, C P McParland, and S J Patton. The icecube data acquisition software: Lessons learned during distributed, collaborative, multi-disciplined software development. In CHEP, Victoria Canada, September 2007. LBNL-778E.
Emmanuel Bresson, Olivier Chevassut, and David Pointcheval. Provably-secure authenticated group diffie-hellman key exchange. ACM Transactions on Information and System Security Journal, 2007. LBNL-54708.
I. Foster, D. Gunter, K. Jackson, J. M. Schopf, and et. Al B. Tierney. Enabling distributed petascale science. In SciDAC, Boston, MA, 2007.
Jose M Gonzalez, Vern Paxson, and Nicholas Weaver. A hardware/software architecture for flexible, high-performance network intrusion prevention. In Proc. ACM CCS, 2007. LBNL-63275.
Jose M Gonzalez, Vern Paxson, and Nicholas Weaver. Shunting: A hardware/software architecture for flexible, high-performance network intrusion prevention. In ACM CCS, October 2007. LBNL-63275.
Dan Gunter, Brian L. Tierney, Aaron Brown, Martin Swany, John Bresnahan, and Jennifer M. Schopf. Log summarization and anomaly detection for troubleshooting distributed systems. In IEEE/ACM International Conference on Grid Computing, Austin, TX, September 2007. LBNL-63468.
Chin Guok, Jason R. Lee, and Karlo Berket. Improving the bulk data transfer experience. Special issue of the journal on Management of IP Networks and Services, 2007. IJIPT.
Marty Humphrey, Mary R. Thompson, and Keith R. Jackson. Security for grids. Proceedings of IEEE, 93(3):644–652, April 2007. LBNL-54853.
J. Jung, R. Milito, and V. Paxson. On the adaptive real-time detection of fast-propagating network worms. In Fourth GI International Conference on Detection of Intrusions & Malware, and Vulnerability Assessment, July 2007.
S. Kamil, A. Pinar, D. Gunter, M. Lijewski, L. Oliker, and J. Shalf. Reconfigurable hybrid interconnection for static and dynamic scientific applications. In Conference on Computing Frontiers, Ischia, Italy, 2007. LBNL-60060.
Wim Lavrijsen and Sebastien Binet. Optimizations in python-based hep analysis. In CHEP Conference, Victoria, Canada, September 2007.
John McCarthy and Bruce Bargmeyer. Ecoinformatics project: Semantics management and semantics services, committee draft 1 of part 3, edition 3 of the iso/iec 11179 metadata registries standard. Technical report, Lawrence Berkeley National Laboratory, August 2007. Co-author, (Authors are not attributed in ISO standards documents.), LBNL-63601.
Vern Paxson, Robin Sommer, and Nicholas Weaver. An architecture for exploiting multi-core processors to parallelize network intrusion prevention. In IEEE Sarnoff Symposium, May 2007. LBNL-63279.
L. Ramakrishnan, Y. Simmhan, and B. Plale. Realization of dynamically adaptive weather analysis and forecasting in lead,. In In Dynamic Data Driven Applications Systems Workshop (DDDAS) in conjunction with ICCS, 2007.
Jennifer M. Schopf, Ann Chervenak, Ian Foster, Dan Fraser, Dan Gunter, Nick LeRoy, and Brian Tierney. End-to-end data solutions for distributed petascale science. CTWatch Quarterly, October 2007.
Brian Tierney and et. al. Dan Gunter. Grid logging: Best practices guide. Technical report, Lawrence Berkeley National Laboratory, 2007. LBNL-663E.
Brian L. Tierney, Dan Gunter, and Jennifer M. Schopf. “the cedps troubleshooting architecture and deployment on the open science grid. In SciDAC, Boston, MA, 2007.
Matthias Vallentin, Robin Sommer, Jason Lee, Craig Leres, Vern Paxson, and Brian Tierney. The nids cluster: Scalable, stateful network intrusion detection on commodity hardware. In Symposium on Recent Advances in Intrusion Detection, Queensland, Australia, September 2007. LBNL-714E.
Nicholas Weaver, Vern Paxson, and Nicholas Weaver. The shunt: An fpga-based accelerator for network intrusion prevention. In FPGA, 2007. LBNL-63281.
I. Zaslavsky, M. Rodriguez, B. Beran, D. Valentine, and C. van Ingen. Olap cube visualization of hydrologic data catalogs. Eos Trans., 88(52), 2007. AGU, Fall Meet. Suppl., Abstract H13H-1684.

2006

M. Abdalla, E. Bresson, O. Chevassut, B. Moeller, and D. Pointcheval. Provably secure password-based authentication in tls. In ACM Symposium on InformAtion, Computer and Communications Security (ASIACCS'06), Taipei, Taiwan, March 2006.
M. Abdalla, E. Bresson, O. Chevassut, and D. Pointcheval. Password-based group key exchange in a constant number of rounds. In Workshop on Practice and Theory in Public Key Cryptography PKC, April 2006.
D. Agarwal and D. Ramsey. Protecting doe office of science resources while maintaining an effective open collaborative science environment, 2006. White paper prepared for Dr. Raymond Orbach, September.
Bruce E. Bargmeyer. Common sense, common logic. ISO Focus Journal, (3), March 2006. LBNL-59983.
K. Berket, A. Essiari, and D. Agarwal. A new approach to asymmetric group communication membership. Technical report, Lawrence Berkeley National Laboratory, June 2006. LBNL-61006.
K. Berket, C. Guok, and J. R. Lee. Improving the bulk data transfer experience. The special issue of the IJIPT journal on Management of IP Networks and Services, 2006.
E. Bresson, O.Chevassut, and D. Pointcheval. The group diffie-hellman protocol,password-based group key exchange in a constant number of rounds. ACM Transactions on Information and System Security, 2006.
E. Bresson, O.Chevassut, and D. Pointcheval. A security solution for ieee 802.11 ad-hoc mode: Password-authentication and group diffie-hellman key exchange. Wireless and International Journal of Mobile Computing (IJWMC)–Special Issue on Security of Computer Network and Mobile Systems, 2006. LBNL-57432.
J. R. Burruss, T. W. Fredian, and M. R. Thompson. Security on the us fusion gridsimplifying fusiongrid security, security challenges of large. In Applications in Distributed Environments (CLADE) workshop at HPDC14,)Research Triangle, Park, NC, July 2006.
O. Chevasut, P. A. Fouque, P. Gaudry, and D. Pointcheval. The twist-augmented technique for key exchange. In International Workshop on Practice and Theory in Public Key Cryptography (PKC), April 2006.
W. Cui, V. Paxson, N. Weaver, and R Katz. Protocol-independent adaptive replay of application dialog. In NDSS, February 2006.
S. Floyd, V. Paxson, and A. Falk. Iab thoughts on the role of the internet research task force (irtf). Technical report, IETF, March 2006. RFC 4440.
C. Guok, D. Robertson, M. Thompson, J. Lee, B. Tierney, and W. Johnston. Intra and interdomain circuit provisioning using the oscars reservation system. In GridNets Third International Workshop on Networks for Grid Applications,, San Jose, CA, October 2006.
E. Hjort, D. Olson, J. Lauret, A. Sim, and A. Shoshani. Data and computational grid decoupling in star an analysis scenario using srm technology. In Computing in High Energy and Nuclear Physics Conference (CHEP), Mumbai, India, February 2006. SLAC-PUB-11582,BABAR-PUB-05-049.
J. Kannan, J. Jung, V. Paxson, and C. Koksal. Semi-automated discovery of application session structure. In ACM Internet Measurement Conference, 2006.
W.T.L.P. Lavrijsen and S. Binet. Eclipse-based physicist work environment. In Computing in High Energy and Nuclear Physics, Mumbai, India, February 2006.
W. Liebig, D. Rousseau, P. Calafiura, W. Lavrijsen, P. Loch, and A. Salzburger. Physics-level job configuration. In Computing in High Energy and Nuclear Physics,, Mumbai, India, February 2006.
Haastrup Palle and Bruce Bargmeyer. Chapter title: Environmental data: Edge issues and the path forward doc_format. Joint Research Center, Ispra, 2006. LBNL-58869.
R. Pang, M. Allman, V. Paxson, and J. Lee. The devil and packet trace anonymization. Computer Communication Review, 36(1), January 2006. LBNL-57630.
Ruoming Pang, Vern Paxson, Robin Sommer, and Larry Peterson. binpac: A yacc for writing application protocol parsers. In ACM Internet Measurement Conference, 2006. LBNL-63283.
V. Paxson, K. Asanovic, S. Dharmapurikar, J. Lockwood, R. Pang, R.Sommer, and N. Weaver. Rethinking hardware support for network analysis and intrusion prevention. In USENIX Hot Security, 2006.
J. Zurawski, M. Swany, and D. Gunter. A scalable framework for representation and exchange of network measurments. In 2nd International IEEE/Create-Net Conference on Testbeds and Research Infrastructures for the Development of Networks and Communities (Tridentcom), 2006.

2005

M. Abdalla, O.Chevassut, P. A . Fouque, and D. Pointcheval. A simple threshold authenticated key exchange from short secrets. In Asiacrypt Conference, India, December 2005.
M. Abdalla, O.Chevassut, and D. Pointcheval. One-time verifier-based encrypted key exchange. In International Workshop on Practice and Theory in Public Key Cryptography (PKC), Switzerland, February 2005.
M. Ackermann and et al. C. McParland. Flux limits on ultra high energy neutrinos with amanda-b10first measurements of inclusive w and z cross sections from run ii of the tevatron collider. Astropart.Phys, 22:339–353, 2005.
M. Allman, E. Blanton, and V. Paxson. An architecture for developing behavioral history. In Steps to Reducing Unwanted Traffic on the Internet (SRUTI), 2005.
A. Antony, J. Blom, C. de Laat, and J. Lee. Exploring practical limitations of tcp over transatlantic networks. High-Speed Networks and Services for Data-Intensive Grids: the DataTAG Project, special issue, Future Generation Computer Systems, 21(4), 2005.
K. Berket, A. Essiari, and M. R. Thompson. Securing resources in collaborative environments: A peer-to-peer approach. In The 17th IASTED International Conference on Parallel and Distributed Computing and Systems (PDCS ),, Phoenix, AZ, November 2005.
W. Bethel, S. Campbell, J. Lee E. Dart, S. A. Smith, K. Stockinger, B. Tierney, and K. Wu. Interactive analysis of large network data collections using query-driven visualization. Technical report, Lawrence Berkeley National Laboratory, 2005. LBNL-59166.
J. R. Burruss, T.W. Fredian, and M.R. Thompson. Security on the us fusion grid. In Fifth International Atomic Energy Agency (IAEA) Technical Meeting on Control, Data Acquisition, and Remote Participation for Fusion Research Fusion Engineering and Design, Budapest, Hungary, July 2005. Elesevier.
J. R. Burruss, T.W. Fredian, and M.R. Thompson. “data security on the national fusion grid. In Fifth International Atomic Energy Agency (IAEA) Technical Meeting on Control, Data Acquisition, and Remote Participation for Fusion Research,, Budapest, Hungary, July 2005.
S. Dharmapurikar and V. Paxson. Robust tcp stream reassembly in the presence of adversaries. In USENIX Security Symposium, Baltimore, Maryland, August 2005.
H. Dreger, C. Kreibich, V. Paxson, and R. Sommer. Enhancing the accuracy of network-based intrusion detection with host-based context. In Conference on Detection of Intrusions and Malware and Vulnerability Assessment (DIMVA), Vienna, Austria,, July 2005.
IceCube Collaboration (A. Achterberg et al.). The icecube collaboration:. In 29th International Cosmic Ray Conference (ICRC), Pune, India,, August 2005.
D. K. Gunter, K. R. Jackson, D. E. Konerding, J. R. Lee, and B. L. Tierney. Essential grid workflow monitoring elements. In International Conference on Grid Computing and Applications (GCA'05), 2005.
D. K. Gunter, B. L. Tierney, and S. J. Bailey. Scalable analysis of distributed workflow traces. In International Conference on Parallel and Distributed Processing Techniques and Applications (PDPTA), 2005.
J. Hellerstein, V. Paxson, L. Peterson, T. Roscoe, S. Shenker, and D. Wetherall. The network oracle. Data Engineering, 28(1), March 2005.
M. Humphrey, G. Wasson, K. Jackson, J. Boverhof, M. Rodriguez, and et al. State and events for web services: A comparison of five ws-resource framework and ws-notification implementations. In High Performance Distributed Computing, August 2005.
M. Humphrey, G. Wasson, K. Jackson, J. Boverhof, M. Rodriguez, J. Gawor, S. Lang, J. Bester, I. Foster, S. Meder, S. Pickles, and M. McKeown. State and events for web services: A comparison of five ws-resource framework and ws-notification implementations. In 14th IEEE International Symposium on High Performance Distributed Computing (HPDC-14), Research Triangle, Park, NC, July 2005.
et al. J. Ahrens, C. McParland. New results from the antarctic muon and neutrino detector array. Nucl.Phys. B Suppl., 143:343–350, June 2005. Paris 2004, Neutrino physics and astrophysics* e-Print Archive: astro-ph/0409423.
A. Kumar, V. Paxson, and N. Weaver. Exploiting underlying structure for detailed reconstruction of an internet scale event. In ACM IMC, October 2005. This is our forensic analysis of the Witty worm.
R. Pang, M. Allman, M. Bennett, J. Lee, V. Paxson, and B. Tierney. A first look at modern enterprise traffic. In ACM Internet Measurement Conference, October 2005.
R. Sommer and V. Paxson. Exploiting independent state for network intrusion detection. In Annual Computer Security Applications Conference, 2005.
M. Thomas, J. Burruss, L. cinquini, G. Fox, D. Gannon, I. Gilbert, G. von Laszewski, K. Jackson, D. Middleton, R. Moore, M. Pierce, B. Plale, A. Rajasekar, R. Regno, E. Roberts, D. Schissel, A. Seth, and W. Schroeder. Grid portal architectures for scientific applications. Journal of Physics, 16:596–600., 2005.
M. Thompson, V. Welch, M. Lorch, R. Lepro, D. Chadwick, and V. Ciaschini. Attributes used in ogsi authorization. In Global Grid Forum, December 2005. GFD-E.057.
V. Yegneswaran, P. Barford, and V. Paxson. Using honeynets for internet situational awareness. In ACM SIGCOMM HotNets, November 2005.

2004

M. Abdalla, O. Chevassut, and D. Pointcheval. One-time verifier-based encrypted key exchange. In 8th International Workshop on Practice and Theory in Public Key Cryptography (PKC), Les Diablerets, Switzerland, January 2004.
M. Ackermann and et al. C. McParland. Search for extraterrestrial point sources of high energy neutrinos with amanda-ii. Phys.Rev.D, 71(77102), December 2004. Using Data Collected in 2000-2002. Dec 5pp. Published in :. e-Print Archive: astro-ph/0412347.
K. Berket, D. Gunter A. Essiari, and W. Hoschek. Peer-to-peer i/o (p2pio) protocol specification. In I/O (P2PIO) Protocol Specification Version 0.6. 2004. LBNL-56402.
E. Bresson, O.Chevassut, A. Essiari, and D. Pointcheval. Mutual authentication and group key agreement for low-power mobile devices. Journal of Computer Communications - Special Issue on Security and Performance in Wireless and Mobile Networks, 2004. PublisherElsevier.
E. Bresson, O.Chevassut, and D. Pointcheval. The group diffie-hellman protocol. In International Workshop on Practice and Theory in Public Key Cryptography (PKC),, Singapore, 2004.
J. Generowicz, W.T.L.P. Lavrijsen, and M. Marino. Reflection-based python-c++ bindings. In Computing in High Energy and Nuclear Physics, Interlaken, Switzerland, September 2004.
K. Jackson, D.E. Konerding, J. Lee, D. Olson, and B. Tierney. The grid2003 production grid: Principles and practice. In 13th IEEE Intl. Symposium on High Performance Distributed Computing (HPDC-13), 2004.
G. Jin. Packet drop avoidance for high-speed network transmission protocol. In International Conference on Information Technology: Research and Education, London, England, 2004. London Metropolitan University.
J. Jung, V. Paxson, A. Berger, and H. Balakrishnan. Fast portscan detection using sequential hypothesis testing. In IEEE Symposium on Security and Privacy, May 2004.
D. Konerding. Review of an essential guide to the basic local alignment search tool. Bioinformatics, 5(1):93–96, March 2004. BLAST by Ian Korf, Mark Yandell and Joseph Bledell.
W.T.C. Kramer, A. Shoshani, D.A. Agarwal, B.R. Draney, G. Jin, G.F. Butler, and J.A. Hules. Deep scientific computing requires deep data. IBM Research and Development, 48(2):209–232, March 2004. LBNL-55724.
W.T.L.P. Lavrijsen. Pybus: A python software bus. In Computing in High-Energy Physics (CHEP ), Interlaken,Switzerland, September 2004.
C. Leggett, P. Calafiura, W. Lavrijsen, M. Marino, and D. Quarrie. The athena control framework in production, new developments and lessons learned. In Computing in High Energy and Nuclear Physics, Interlaken, Switzerland, September 2004.
F. Liang, S. Meder, O. Chevassut, and F. Siebenlist. Secure password-based authenticated key exchange for web services. In ACM Computer and Communications Security (ACM CCS), Workshop on Secure Web Services, Washington, DC, October 2004.
S. Staniford N. Weaver, D. Ellis and V. Paxson. Worms vs. perimeters: The case for hard-lans. In Hot Interconnects, August 2004.
R. Pang, V. Yegneswaran, P. Barford, V. Paxson, and L. Peterson. Characteristics of internet background radiation. In ACM IMC, October 2004.
V. Paxson. Strategies for sound internet measurement. In ACM IMC, October 2004.
P. Schissel, K. Keahey, T. Araki, J.R. Burruss, E. Feibush, S.M. Flanagan, I. Foster, T.W. Fredian, M.J. Greenwald, S.A. Klasky, T. Leggett, K. Li, D.C. McCune, P. Lane, M.E. Papka, Q. Peng, L. Randerson, A. Sanderson, J. Stillerman, M.R. Thompson, and G. Wallace. The national fusion collaboratory project. In Applying Grid Technology For Magnetic Fusion Research, Workshop on Case Studies on Grid Applications, Berlin, Germany, March 2004.
J. Schopf and K. Jackson. “so you want to set up a grid. In ClusterWorld, 2:2., 2004.
W. Sjouw, A. Antony, J. Blom, C. de Laat, and J. Lee. Tcp behaviour on transatlantic lambda's. In Grid Computing: First European Across Grids Conference, Santiago de, Compostela, Spain, February 2004.
R. Sommer and V. Paxson. Exploiting independent state for network intrusion detection. Technical report, Technische University Munchen, November 2004. TUM-I0420.
S. Staniford, D. Moore, V. Paxson, and N. Weaver. The top speed of flash worms. In ACM CCS WORM, October 2004.
S.Tueke, V. Welch, D.Engert, L.Pearlman, and M.Thompson. Internet x.509 public key infrastructure proxy certificate profile, June 2004. IETF RFC3820.
N. Weaver and V. Paxson. A worst-case worm. In Third Annual Workshop on Economics and Information Security (WEIS04), May 2004.
N. Weaver, S. Staniford, and V. Paxson. Very fast containment of scanning worms. In USENIX Security Symposium, August 2004.

2003

J. Adams and et al. D. Olson. Star collaboration transverse momentum and collision energy dependence of high pt hadron suppression in au+au collisions at ultrarelativistic energies . Phys. Rev. Lett, 91(172302), 2003. LBNL-53977.
D. Agarwal and K. Berket. Supporting dynamic ad hoc collaboration capabilities. In Conference for Computing in High Energy and Nuclear Physics, La Jolla, March 2003.
D. Agarwal, J. M. Gonzalez, J. Guojun, and B. Tierney. An infrastructure for passive network monitoring of application data streams. In ACM Internet Measurement Conference, Taormina, Italy, October 2003.
D. Agarwal, M.Lorch, M.Thompson, and M. Perry. A new security model for collaborative environments. In Workshop on Advanced Collaborative Environments,, Seattle, WA, June 2003.
D. A. Agarwal, K. Berket, and O. Chevassut. Enabling efficient group communication in a collaborative enviroment. In Workshop on Advanced Collaborative Environments, Seattle, WA, June 2003.
X. Bai, T. Gaisser, S. Tilav (Bartol Research Ins), J. Becker, k. H Becker, P. Ekstrom, H. Geenen, A. Gross, K. Goldmann, T.Messarius, and et. Al. W. Rhode. Search for diffuse fluxes of extraterrestrial muon-neutrinos with the amanda detector. In 28th International Cosmic Ray Conferences (ICRC), Tsukuba, Japan, July 2003. LBNL-53668.
A. Bazan, T. Bouedo, LAPP) P. Ghez (Annecy, M. Marino, and Berkeley) C. Tull (LBL. The athena data dictionary and description language. In Conference for Computing in High-Energy and Nuclear Physics (CHEP), page 4, La Jolla, California, May 2003. CHEPMOJT010.
A. Bazan, T. Bouedo, LAPP) P. Ghez (Annecy, M. Marino, and Berkeley) C. Tull (LBL. The athena data dictionary and description language. In Conference for Computing in High-Energy and Nuclear Physics (CHEP), La Jolla, California, May 2003. CHEP-MOJT010, May 4pp.Talk given at , La Jolla, California, March MOJT010.
K. Berket and D. Agarwal. Enabling secure ad-hoc collaboration. In Proceedings of the Workshop on Advanced Collaborative Environments, Seattle, WA, June 2003. LBNL-52895.
E. Bresson, O. Chevassut, and D. Pointcheval. New security results on encrypted key exchange. In International Workshop on Practice and Theory in Public Key Cryptographyc (PKC), Singapore, March 2003.
E. Bresson, O. Chevassut, and D. Pointcheval. Security proofs for an efficient password-based key exchange. In 10th ACM Conference on Computer and Communications Security (ACM CCS'03), Washington DC, 2003.
E. Bresson, O.Chevassut, A. Essiari, , and D. Pointcheval. Mutual authentication and group key agreement for low-power mobile devices. In 5th IFIP-TC6 International Conference on Mobile and Wireless Communications Networks, Singapore, October 2003.
J. Burress, S. Flanagan, K. Keahey, C. Ludescher, D.C. McCune, Q. Peng, L. Randerson, D.P. Schissel, and M. Thompson. Remote computing using the national fusion grid. In 4th IAEA Technical Meeting on Control, Data Acquisition, and Remote Participation for Fusion Research, San Diego, July 2003.
P. Calafiura, C.G. Leggett, D.R. Quarrie, H. Ma, and S.Rajagopalan. The storegate: A data model for the atlas software architecture. In Conference for Computing in High-Energy and Nuclear Physics (CHEP 03)24-28 Mar . In the Proceedings of Conference for Computing in High-Energy and Nuclear Physics (CHEP),, La Jolla, California,, March 2003. CHEP–MOJT008, ATL-SOFT-009, Jun 4pp. Mar 2003, pp MOJT008.
S. Cannon, D. Olson S. Chan, C. E. Tull, V. Welch, and L. Pearlman. Using cas to manage role based vo subgroups. In Computing in High-Energy and Nuclear Physics (CHEP 03), page 5, La Jolla, California, March 2003. CHEP-2003-TUBT004.
R. Chytracek, J. Generowicz, W. Lavrijsen, M. Marino, P. Mato, L. Moneta, S. Roiser, L. Tuura, and M. Winkler. Status of the seal project. In 9th International Workshop on Advanced Computing and Analysis Techniques in Physics Research (ACAT 03), Tsukuba, Japan, December 2003. 5pp. Published in Nucl.Instrum.Meth.A534:115-119,2004.
J. Gonzalez and pktd V. Paxson. A packet capture and injection daemon, proc. passive & active measurement. In PAM, 2003.
D. Gunter and B. Tierney. Netlogger: A toolkit for distributed system tuning and debugging. In Proceedings of The 8th IFIP/IEEE International Symposium on Integrated Network Management, Colorado Springs, CO, March 2003.
D. Gunter, W. Lavrijsen, D. Quarrie, B. Tierney, and C. Tull. Gma instrumentation of the athena framework using netlogger. In Computing in High Energy and Nuclear Physics, La Jolla, CA, March 2003. LBNL-52977.
D. Gunter, B. Tierney, C. E. Tull, and V. Virmani. On-demand grid application tuning and debugging with the netlogger activation service. In 4th International Workshop on Grid Computing (Grid), 2003.
K. Harrison, W.T.L.P. Lavrijsen, C.E. Tull, P. Mato, A. Soroko, C.L. Tan, N. Brook, and R.W.L. Jones. Ganga: a user-grid interface for atlas and lhcb. In Computing in High Energy and Nuclear Physics, La Jolla, CA, March 2003. published in eConf C0303241:TUcT002.
G. Jin. Available bandwidth measurement and sampling. In ISMA Bandwidth Estimation Workshop Best, SDSC Auditorium, 2003.
G. Jin and B. Tierney. Netest: A tool to measure maximum burst size, available bandwidth and achievable throughput“. In Proceedings of the International Conference on Information Technology, Newark, New Jersey, August 2003.
G. Jin and B. Tierney. System capability effects on algorithms for network bandwidth measurement. In Proceedings of the Internet Measurement Conference, Miami Beach, Florida, October 2003.
W.T.L.P. Lavrijsen. The athena startup kit. In Conference for Computing in High-Energy and Nuclear Physics (CHEP 03), La Jolla, California, June 2003. CHEP–TUJT002, Jun . 5pp.Contributed to 2003 Proceedings of Conference for Computing in High-Energy and Nuclear Physics (CHEP 03) Mar pp TUJT002.
B. Lowekamp, B. Tierney, Les Cottrell, R. Hughes-Jones, T. Kielmann, and M. Swany. Enabling network measurement portability through a hierarchy of characteristics. In 4th International Workshop on Grid Computing,, 2003. LBNL-53013.
D. Moore, V. Paxson, S. Savage, C. Shannon, S. Staniford, and N. Weaver. Inside the slammer worm. In Security and Privacy, July/August 2003.
M.Thompson, A. Essiari, and S. Mudumbai. Certificate-based authorization policy in a pki environment. In ACM Transactions on Infomation and System Security, pages 566–588, November 2003.
R. Pang and V. Paxson. A high-level programming environment for packet trace anonymization and transformation. In ACM SIGCOMM, August 2003.
S. Peggs, T. Satogata, D. Agarwal, and D. Rice. Remote operations in a global accelerator network. In Particle Accelerator Conference, Portland, OR, 2003.
M. Perry and D. Agarwal. Collaborative editing within the pervasive collaborative computing environment. In European Computer Support for Cooperative Work Conference (ECSCW2003),, Helsinki, Finland, 2003. 5th International Workshop on Collaborative Editing,.
Berkeley) S. Patton (LBL. Concrete uses of xml in software development and data analysis. In Computing in High-Energy and Nuclear Physics (CHEP), La Jolla, California, March 2003. CHEP-MOJT004, Jun . 8pp. Talk March: MOJT004.
Berkeley) S. Patton (LBL. Faye: A java implement of the frame / stream / stop analysis model. In Conference for Computing in High-Energy and Nuclear Physics (CHEP),, Jolla, California,, June 2003. CHEP–MOLT005, Jun 5pp. Talk.
Berkeley) S. Patton (LBL and Madison) D. Glowacki (Wisconsin U. Icecube's development environment. In Computing in High Energy and Nuclear Physics, La Jolla, CA, March 2003.
U. Shankar and V. Paxson. Active mapping: Resisting nids evasion without altering traffic. In IEEE Symposium on Security and Privacy, May 2003.
W. Sjouw, A. Antony, J. Blom, C. de Laat, and J. Lee. Tcp behaviour on transatlantic lambda's. Springer Verlag LNCS, 2003.
R. Sommer and V. Paxson. Enhancing byte-level network intrusion detection signatures with context. In ACM CCS, 2003.
M.R. Thompson and K.R. Jackson. Resource Management for Grid Computing., chapter Security issues of grid management. Kluwer Academic Press, 2003. LBNL-52141.
M.R. Thompson, A. Essiari, V. Welch K. Keahey, S.Lang, and B.Lui. Fine-grained authorization for job and resource management using akenti and globus. In Computing in High Energy and Nuclear Physics (CHEP), March 2003.
B. Tierney. Using netlogger and web100 for tcp analysis. In First International Workshop on Protocols for Fast Long-Distance Networks, Geneva, Switzerland, 2003.
B. Tierney and J. Hollingsworth. The Grid: Blueprint for a New Computing Infrastructure, 2nd Edition, chapter Grid Monitoring and Instrumentation. Morgan-Kaufman, 2003.
B. Tierney and J. Hollingsworth. Instrumentation and monitoring. In F. A. Kesselman, editor, The Grid 2: Blueprint for a New Computing Infrastructure. Elsevier, 2003. LBNL-52496.
G. von Laszewski, J. Gawor, S. Krishnan, and K. Jackson. Creating and managing grid services in grid computing, a practical guide to technology and applications. Technical report, Hingham, MA, 2003. Charles River Media.
G. von Laszweski, J. Gawor, S. Krishnan, and K. Jackson. Commodity grid kits: Middleware for building grid computing environments. In FranBerman, Anthony J.G. Hey, and Geoffrey Fox, editors, Grid Computing: Making The Global Infrastructure a Reality. John Wiley, 2003. ISBN: 0-470-85319-0.
N. Weaver, V. Paxson, S. Staniford, and R. Cunningham. A taxonomy of computer worms. In ACM CCS, October 2003. Workshop on Rapid Malcode.

2002

D. Agarwal, C. McParland, and M. Perry. Supporting collaborative computing and interaction. In Grace Hopper Celebration of Women in Computing, Vancouver, Canada, October 2002. LBNL-50418.
D. Agarwal, G. Olson, and J. Olson. Collaboration tools for the global accelerator network workshop report. Technical report, University of California, 2002. LBNL-53253.
A. Antony, J. Blom, C. de Laat, J. Lee, and W. Sjouw. Microscopic examination of tcp flows over transatlantic links,. Technical report, University of Amsterdam, October 2002. special issue of FGCS.
K. Berket, D. A. Agarwal, and O. Chevassut. Practical approach to the intergroup protocols. Future Generation Computer Systems, 18(5):709–719, April 2002. LBNL-49126.
E. Bresson, O.Chevassut, and D. Pointcheval. Group diffie-hellman key exchange secure against dictionary attacks. In Asiacrypt, Queenstown, New Zealand, December 2002.
E. Bresson, O.Chevassut, and D. Pointcheval. Group diffie-hellman key exchange under standard assumptions. Eurocrypt, 6(4):566–88, November 2002. LBNL-49087.
O. Chevassut. Authenticated group diffie-hellman key exchange : Theory and practice, September 2002. Ph.D. Dissertation, University Catholic of Louvain, LBNL-51150.
K. R. Jackson. Pyglobus: A python interface to the globus toolkit. Concurrency and Computation: Practice and Experience, 14:(13–15), 2002. LBNL-49370.
J. Lee, D. Gunter, M. Stoufer, and B. Tierney. Monitoring data archives for grid environments. In Supercomputing, ACM/IEEE 2002 Conference, page 66, Baltimore, Maryland, November 2002.
Dunigan T., M. Mathis, and B. Tierney. A tcp tuning daemon. In IEEE Supercomputing,, Baltimore, Maryland, 2002. LBNL-51022.

2001

D. Agarwal. Discussion of reliable multicast deployment progress for the continuous data protocol. In 23rd Annual DoD/DOE Seismic Research Review: Worldwide Monitoring of Nuclear Explosions, Jackson Hole, WY, Oct 2001.
D. Agarwal, O. Chevassut, and G. Tsudik. Integrating access control with secure group communication for wide-area networks. In Network and Distributed System Security Symposium, San Diego, CA, February 2001.
Deb Agarwal, Brian Tierney, Dan Gunter, Jason Lee, and William Johnston. Network aware high-performance distributed applications. In Proceedings of the Workshop on New Visions for Large-Scale Networks: Research and Applications, Vienna, VA, March 2001.
K. Berket, D. A. Agarwal, P. M. Melliar-Smith, and L. E. Moser. Overview of the intergroup protocols. LNCS, (2073):316–25, 2001. Proceedings of the International Conference on Computational Science, LBNL-47567.
W. Bethel, B. Tierney, J. Lee, D. Gunter, and S. Lau. Using high-speed wans and network data caches to enable remote and distributed visualization. In 10th IEEE Symposium on High Performance Distributed Computing, August 2001. ( HPDC-10 ).
O. Chevassut, E. Bresson, and D. Pointcheval. Provably authenticated group diffie-hellman key exchange - the dynamic case. In Asiacrypt'01, Queensland, Australia, December 2001. pp 290-309.
O. Chevassut, E. Bresson, D. Pointcheval, and J.-J. Quisquater. Provably authenticated group diffie-hellman key exchange. In 8th ACM Conference on Computer and Communications Security, Philadelphia, Pennsylvania, November 2001.
I. Gaponenko, A. Mokhtarani, S. Patton, Berkeley) D. Quarrie (LBL, A. Adesanya, A. Hanushevsky J. Becla, A. Hasan, and A. Trunov (SLAC). The babar database: Challenges, trends and projections. In CHEP'01: Computing in High-Energy Physics and Nuclear, Beijing, China, September 2001. SLAC-PUB-9179.
G. Jin, G. Yang, B. Crowley, and D. Agarwal. Network characterization service (ncs). In 10th IEEE Symposium on High Performance Distributed Computing, San Francisco, CA, August 2001. LBNL-47892.
S. Loken and C. McParland. Workflow management for a cosmology collaboratory. In CHEP, Beijing, China, 2001.
Berkeley) Simon Patton (LBL and Akbar Mohktarani (SLAC). Support in the babar objectivity database for multiple federations. In CHEP'01: Computing in, High-EnergyPhysics and Nuclear, Beijing, China, September 2001. 1pp.Abstract.
Jacek Becla (SLAC) and Berkeley) Igor Gaponenko (LBL. Optimizing parallel access to the babar database system using corba servers. In CHEP: Computing in High-Energy Physics and Nuclear, Beijing, China, September 2001. SLAC-PUB-9176.